skills/analysis/dataviz/color-accessibility-guide/SKILL.md
Colorblind-friendly palettes and accessible visualization design
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Design data visualizations that are accessible to colorblind readers and follow best practices for clarity, using tested palettes and encoding principles.
Approximately 8% of males and 0.5% of females have some form of color vision deficiency (CVD). The most common types:
| Type | Prevalence (Male) | Affected Colors | Commonly Confused | |------|-------------------|-----------------|-------------------| | Deuteranomaly (green-weak) | 5% | Green | Red and green | | Protanomaly (red-weak) | 1% | Red | Red and green | | Deuteranopia (no green) | 1% | Green | Red and green | | Protanopia (no red) | 1% | Red | Red and green | | Tritanopia (no blue) | 0.003% | Blue | Blue and yellow | | Monochromacy | Very rare | All | All colors |
Key takeaway: Never rely solely on a red-green distinction to convey information. About 1 in 12 male readers cannot distinguish them.
Widely recommended for scientific publications:
# Wong's colorblind-friendly palette
wong_palette = {
"black": "#000000",
"orange": "#E69F00",
"sky_blue": "#56B4E9",
"bluish_green":"#009E73",
"yellow": "#F0E442",
"blue": "#0072B2",
"vermillion": "#D55E00",
"reddish_purple":"#CC79A7"
}
okabe_ito = ["#E69F00", "#56B4E9", "#009E73", "#F0E442",
"#0072B2", "#D55E00", "#CC79A7", "#000000"]
# Paul Tol's qualitative palette (up to 12 distinct colors)
tol_qualitative = ["#332288", "#88CCEE", "#44AA99", "#117733",
"#999933", "#DDCC77", "#CC6677", "#882255",
"#AA4499", "#661100", "#6699CC", "#888888"]
For continuous data, use perceptually uniform colormaps:
import matplotlib.pyplot as plt
# Recommended sequential colormaps
# These are perceptually uniform and colorblind-safe:
good_cmaps = ["viridis", "plasma", "inferno", "magma", "cividis"]
# Avoid these (not perceptually uniform, not colorblind-safe):
bad_cmaps = ["jet", "rainbow", "hsv"] # NEVER use these
# Example usage
import numpy as np
data = np.random.randn(10, 10)
fig, ax = plt.subplots(figsize=(8, 6))
im = ax.imshow(data, cmap="viridis")
plt.colorbar(im)
plt.title("Use viridis, not jet")
plt.savefig("heatmap.pdf", dpi=300, bbox_inches="tight")
# Colorblind-safe diverging palettes
# Blue-to-Red via white (good for temperature, correlation)
import matplotlib.colors as mcolors
# Built-in matplotlib options:
diverging_safe = ["RdBu_r", "PuOr_r", "BrBG"]
# Custom two-color diverging (Tol):
tol_diverging = ["#364B9A", "#4A7BB7", "#6EA6CD", "#98CAE1", "#C2E4EF",
"#EAECCC", "#FEDA8B", "#FDB366", "#F67E4B", "#DD3D2D", "#A50026"]
Edward Tufte's principle: maximize the proportion of ink used to display actual data.
import matplotlib.pyplot as plt
fig, (ax1, ax2) = plt.subplots(1, 2, figsize=(12, 5))
# BAD: Low data-ink ratio (chartjunk)
ax1.bar(range(5), [3, 7, 2, 5, 8], color="blue", edgecolor="black",
linewidth=2)
ax1.set_facecolor("#EEEEEE")
ax1.grid(True, color="white", linewidth=2)
ax1.set_title("Before: Low Data-Ink Ratio")
# GOOD: High data-ink ratio
ax2.bar(range(5), [3, 7, 2, 5, 8], color="#0072B2", edgecolor="none")
ax2.spines["top"].set_visible(False)
ax2.spines["right"].set_visible(False)
ax2.set_title("After: High Data-Ink Ratio")
plt.tight_layout()
plt.savefig("data_ink_ratio.pdf", dpi=300)
Never use color as the sole channel for conveying information. Combine color with at least one other visual channel:
| Channel | Examples | |---------|----------| | Shape | Circles, squares, triangles for different groups | | Pattern | Solid, dashed, dotted lines | | Fill pattern | Hatching, cross-hatching for bar charts | | Label | Direct text labels on or near data points | | Position | Separate panels (facets) for each group | | Size | Varying point sizes |
import matplotlib.pyplot as plt
markers = ['o', 's', '^', 'D'] # Different shapes
colors = ['#0072B2', '#D55E00', '#009E73', '#CC79A7']
labels = ['Group A', 'Group B', 'Group C', 'Group D']
fig, ax = plt.subplots(figsize=(8, 6))
for i in range(4):
ax.scatter(x[i], y[i], c=colors[i], marker=markers[i],
s=80, label=labels[i], edgecolors='black', linewidth=0.5)
ax.legend()
ax.set_xlabel("X Variable")
ax.set_ylabel("Y Variable")
plt.savefig("redundant_encoding.pdf", dpi=300)
line_styles = ['-', '--', '-.', ':', (0, (3, 1, 1, 1))]
colors = ['#0072B2', '#D55E00', '#009E73', '#CC79A7', '#E69F00']
fig, ax = plt.subplots(figsize=(8, 5))
for i in range(5):
ax.plot(x, data[i], color=colors[i], linestyle=line_styles[i],
linewidth=2, label=f"Method {i+1}")
ax.legend()
| Tool | Platform | URL | |------|----------|-----| | Coblis | Web | color-blindness.com/coblis | | Color Oracle | Desktop (Win/Mac/Linux) | colororacle.org | | Sim Daltonism | macOS | michelf.ca/projects/sim-daltonism | | Colorblindly | Chrome extension | Chrome Web Store | | Matplotlib CVD simulation | Python | See code below |
from colorspacious import cspace_convert
import numpy as np
def simulate_cvd(rgb_hex, deficiency="deuteranomaly", severity=100):
"""Simulate how a color appears to someone with CVD."""
# Convert hex to RGB [0,1]
rgb = np.array([int(rgb_hex[i:i+2], 16)/255 for i in (1, 3, 5)])
# Convert using colorspacious
cvd_space = {"name": "sRGB1+CVD",
"cvd_type": deficiency,
"severity": severity}
rgb_cvd = cspace_convert(rgb, cvd_space, "sRGB1")
rgb_cvd = np.clip(rgb_cvd, 0, 1)
return "#{:02x}{:02x}{:02x}".format(*[int(c*255) for c in rgb_cvd])
# Test your palette
for color in ["#FF0000", "#00FF00", "#0072B2", "#D55E00"]:
sim = simulate_cvd(color)
print(f"{color} -> {sim} (deuteranomaly)")
| Do | Don't | |----|-------| | Use Wong or Okabe-Ito palettes | Use red vs. green to distinguish categories | | Use viridis/cividis colormaps | Use jet/rainbow colormaps | | Add shape/pattern as redundant encoding | Rely on color alone | | Use direct labels when possible | Force readers to match colors to legend repeatedly | | Test with CVD simulators | Assume your color choices work for everyone | | Use high contrast (WCAG AA: 4.5:1 ratio) | Use light colors on white backgrounds | | Keep maximum 7-8 colors in categorical charts | Use 15+ colors that are impossible to distinguish |
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