stanislavjiricek/phase-data-analyze
skills/phase-data-analyze/SKILL.md
Phase guidance for the neuroflow /data-analyze command. Loaded automatically when /data-analyze is invoked to orient agent behavior, relevant skills, and workflow hints for the data-analyze phase.
$ install --global
skillsauthnpx skillsauth add stanislavjiricek/neuroflow phase-data-analyzeInstall this skill globally with one command. Works with Claude Code, Cursor, and Windsurf.
Security Scan Results
3 of 9 scanners reported clean
Some scanners were skipped, did not run, or reported a non-clean status. Review each row below.
3
Scanners Passed
9
Scanners in report
Clean
TrivyContainer and dependency vulnerability scanner
95%
Clean
SemgrepStatic code analysis for vulnerabilities
95%
Clean
mcp-scan (Snyk)Model Context Protocol security validation
95%
Skipped
Snyk (dep)Open source security scanning
50%
Skipped
Socket.devSupply chain security analysis
50%
Skipped
VirusTotalMulti-engine malware detection
50%
Skipped
CrowdStrikeAdvanced threat intelligence
50%
Skipped
OSV-ScannerOpen Source Vulnerability database check
50%
Skipped
OWASP Dep-Check
50%
Last scanned: Jun 5, 2026, 5:02 AM213.7s1 file scanned
SKILL.md
- name:
- phase-data-analyze
- description:
- Phase guidance for the neuroflow /data-analyze command. Loaded automatically when /data-analyze is invoked to orient agent behavior, relevant skills, and workflow hints for the data-analyze phase.
phase-data-analyze
The data-analyze phase applies statistical and computational methods to preprocessed data to test the research hypothesis.
Approach
- Read
.neuroflow/ideation/for the research question and.neuroflow/data-preprocess/for the preprocessing report before choosing methods - Write an
analysis-plan.mdfirst; do not write analysis code before the plan is accepted - Audit statistical assumptions explicitly (normality, sphericity, independence) before selecting tests
- Apply appropriate multiple-comparison correction; if omitted, flag it and explain why
Relevant skills
neuroflow:neuroflow-core— read first; defines the command lifecycle and.neuroflow/write rulesneuroflow:bids— invoke when querying dataset structure with pybids, loading subject/session/task metadata from participants.tsv and events.tsv, or writing analysis outputs to BIDS derivatives
Workflow hints
- All code, results, and figures go to
output_path(scripts/analysis/,results/,figures/), not inside.neuroflow/ - Save
analysis-plan.mdto.neuroflow/data-analyze/before running any scripts - Log deviations from a pre-registered analysis plan in
.neuroflow/reasoning/data-analyze.json
Slash command
/neuroflow:data-analyze — runs this workflow as a slash command.
Related Skills
stanislavjiricek/bids
testing
VerifiedTrustedCommunity
This skill should be used whenever the user mentions BIDS, Brain Imaging Data Structure, BIDS conversion, BIDS validation, BIDS compliance, organizing neuroimaging data, dataset_description.json, participants.tsv, bids-validator, pybids, MNE-BIDS, or asks how to structure EEG/MEG/fMRI/iEEG/PET/DWI data for sharing or preprocessing. Also invoke when the user asks how to name scan files, what sidecar JSON fields are needed, how to set up derivatives/, or how to run fMRIPrep/MRIQC on their dataset. Invoke proactively during /data, /data-preprocess, and /data-analyze phases whenever the dataset structure is relevant to the task at hand.
3SKILL.mdUpdated Jun 5, 2026
stanislavjiricek/phase-meeting
tools
VerifiedTrustedCommunity
Phase guidance for the /meeting command. Covers meeting file structure, recurring templates, attendee resolution from profiles, Google Calendar MCP integration, agenda preparation with project context, and action-item-to-task conversion at all three levels (project, flowie, hive).
3SKILL.mdUpdated Apr 25, 2026
stanislavjiricek/worker-critic
data-ai
VerifiedTrustedCommunity
Worker-critic agentic loop protocol — orchestrator coordinates a worker agent and a critic agent across up to 3 revision cycles to produce a vetted output for any phase.
3SKILL.mdUpdated Apr 14, 2026
stanislavjiricek/wiki
development
VerifiedTrustedCommunity
Knowledge base skill — Karpathy-style LLM-maintained wiki at three levels (personal/flowie, project, team/hive). Handles ingest, query, lint, schema, and project-tagging workflows. Invoked by /flowie --wiki-* (personal), /wiki (project), /hive --wiki-* (team).
3SKILL.mdUpdated Apr 14, 2026