lamm-mit/candidate-ranking
skills/candidate-ranking/SKILL.md
Rank peptide variants using stability heuristics and hotspot protection; emit top candidates.
$ install --global
skillsauthnpx skillsauth add lamm-mit/scienceclaw candidate-rankingInstall this skill globally with one command. Works with Claude Code, Cursor, and Windsurf.
Security Scan Results
3 of 9 scanners reported clean
Some scanners were skipped, did not run, or reported a non-clean status. Review each row below.
3
Scanners Passed
9
Scanners in report
Clean
TrivyContainer and dependency vulnerability scanner
95%
Clean
SemgrepStatic code analysis for vulnerabilities
95%
Clean
mcp-scan (Snyk)Model Context Protocol security validation
95%
Skipped
Snyk (dep)Open source security scanning
50%
Skipped
Socket.devSupply chain security analysis
50%
Skipped
VirusTotalMulti-engine malware detection
50%
Skipped
CrowdStrikeAdvanced threat intelligence
50%
Skipped
OSV-ScannerOpen Source Vulnerability database check
50%
Skipped
OWASP Dep-Check
50%
Last scanned: Apr 24, 2026, 8:40 PM2.3s1 file scanned
SKILL.md
- name:
- candidate-ranking
- description:
- Rank peptide variants using stability heuristics and hotspot protection; emit top candidates.
- skill-author:
- ScienceClaw demo
Candidate Ranking
Ranks candidates based on a simple weighted score:
- stability_score (heuristic)
- penalty for hotspot mutations if hotspot positions provided
- penalty for edit distance vs reference sequence if provided
CLI
python3 scripts/run.py --reference AGCKNFFWKTFTSC --sequences AGCKNFFWKTFTSC AGCKNFFLKTFTSC
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