platform/plugin-development/claude-md-management/skills/claude-md-improver/SKILL.md
Audit and improve CLAUDE.md files in repositories. Use when user asks to check, audit, update, improve, or fix CLAUDE.md files. Scans for all CLAUDE.md files, evaluates quality against templates, outputs quality report, then makes targeted updates. Also use when the user mentions "CLAUDE.md maintenance" or "project memory optimization".
npx skillsauth add harsh040506/claude-code-unified-skill-plugin-library claude-md-improverInstall this skill globally with one command. Works with Claude Code, Cursor, and Windsurf.
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Audit, evaluate, and improve CLAUDE.md files across a codebase to ensure Claude Code has optimal project context.
This skill can write to CLAUDE.md files. After presenting a quality report and getting user approval, it updates CLAUDE.md files with targeted improvements.
Find all CLAUDE.md files in the repository:
find . -name "CLAUDE.md" -o -name ".claude.md" -o -name ".claude.local.md" 2>/dev/null | head -50
File Types & Locations:
| Type | Location | Purpose |
|------|----------|---------|
| Project root | ./CLAUDE.md | Primary project context (checked into git, shared with team) |
| Local overrides | ./.claude.local.md | Personal/local settings (gitignored, not shared) |
| Global defaults | ~/.claude/CLAUDE.md | User-wide defaults across all projects |
| Package-specific | ./packages/*/CLAUDE.md | Module-level context in monorepos |
| Subdirectory | Any nested location | Feature/domain-specific context |
Note: Claude auto-discovers CLAUDE.md files in parent directories, making monorepo setups work automatically.
For each CLAUDE.md file, evaluate against quality criteria. See references/quality-criteria.md for detailed rubrics.
Quick Assessment Checklist:
| Criterion | Weight | Check | |-----------|--------|-------| | Commands/workflows documented | High | Are build/test/deploy commands present? | | Architecture clarity | High | Can Claude understand the codebase structure? | | Non-obvious patterns | Medium | Are gotchas and quirks documented? | | Conciseness | Medium | No verbose explanations or obvious info? | | Currency | High | Does it reflect current codebase state? | | Actionability | High | Are instructions executable, not vague? |
Quality Scores:
ALWAYS output the quality report BEFORE making any updates.
Format:
## CLAUDE.md Quality Report
### Summary
- Files found: X
- Average score: X/100
- Files needing update: X
### File-by-File Assessment
#### 1. ./CLAUDE.md (Project Root)
**Score: XX/100 (Grade: X)**
| Criterion | Score | Notes |
|-----------|-------|-------|
| Commands/workflows | X/20 | ... |
| Architecture clarity | X/20 | ... |
| Non-obvious patterns | X/15 | ... |
| Conciseness | X/15 | ... |
| Currency | X/15 | ... |
| Actionability | X/15 | ... |
**Issues:**
- [List specific problems]
**Recommended additions:**
- [List what should be added]
#### 2. ./packages/api/CLAUDE.md (Package-specific)
...
After outputting the quality report, ask user for confirmation before updating.
Update Guidelines (Critical):
Propose targeted additions only - Focus on genuinely useful info:
Keep it minimal - Avoid:
Show diffs - For each change, show:
Diff Format:
### Update: ./CLAUDE.md
**Why:** Build command was missing, causing confusion about how to run the project.
```diff
+ ## Quick Start
+
+ ```bash
+ npm install
+ npm run dev # Start development server on port 3000
+ ```
### Phase 5: Apply Updates
After user approval, apply changes using the Edit tool. Preserve existing content structure.
## Templates
See [references/templates.md](references/templates.md) for CLAUDE.md templates by project type.
## Common Issues to Flag
1. **Stale commands**: Build commands that no longer work
2. **Missing dependencies**: Required tools not mentioned
3. **Outdated architecture**: File structure that's changed
4. **Missing environment setup**: Required env vars or config
5. **Broken test commands**: Test scripts that have changed
6. **Undocumented gotchas**: Non-obvious patterns not captured
## User Tips to Share
When presenting recommendations, remind users:
- **`#` key shortcut**: During a Claude session, press `#` to have Claude auto-incorporate learnings into CLAUDE.md
- **Keep it concise**: CLAUDE.md should be human-readable; dense is better than verbose
- **Actionable commands**: All documented commands should be copy-paste ready
- **Use `.claude.local.md`**: For personal preferences not shared with team (add to `.gitignore`)
- **Global defaults**: Put user-wide preferences in `~/.claude/CLAUDE.md`
## What Makes a Great CLAUDE.md
**Key principles:**
- Concise and human-readable
- Actionable commands that can be copy-pasted
- Project-specific patterns, not generic advice
- Non-obvious gotchas and warnings
**Recommended sections** (use only what's relevant):
- Commands (build, test, dev, lint)
- Architecture (directory structure)
- Key Files (entry points, config)
- Code Style (project conventions)
- Environment (required vars, setup)
- Testing (commands, patterns)
- Gotchas (quirks, common mistakes)
- Workflow (when to do what)
testing
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tools
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Run nf-core bioinformatics pipelines (rnaseq, sarek, atacseq) on sequencing data. Use when analyzing RNA-seq, WGS/WES, or ATAC-seq data—either local FASTQs or public datasets from GEO/SRA. Triggers on nf-core, Nextflow, FASTQ analysis, variant calling, gene expression, differential expression, GEO reanalysis, GSE/GSM/SRR accessions, or samplesheet creation.