skills/22-christopherkenny-skills/skills/markdown-unwrap/SKILL.md
Unwraps hard-wrapped markdown files so that each sentence ends with a newline instead of mid-sentence line breaks. Joins continuation lines within a paragraph into single lines, then re-breaks at sentence boundaries (period, question mark, exclamation point). Preserves blank lines, headings, fenced code blocks, block quotes, and list items. Use when asked to unwrap text, fix line breaks, reflow sentences, or clean up hard-wrapped markdown or .qmd files.
npx skillsauth add brycewang-stanford/Awesome-Agent-Skills-for-Empirical-Research markdown-unwrapInstall this skill globally with one command. Works with Claude Code, Cursor, and Windsurf.
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Reflow a markdown (or .qmd) file so that each sentence occupies its own line. This is the inverse of hard-wrapping: mid-sentence newlines are removed and the text is re-broken only at sentence endings.
| Position | Required | Description |
|----------|----------|-------------|
| 1 | Yes | Path to the input .md or .qmd file |
| 2 | No | Output path. Defaults to overwriting the input file in-place |
Example invocations:
/markdown-unwrap paper/paper.qmd
/markdown-unwrap README.md README-unwrapped.md
Process the file line-by-line, maintaining a current paragraph buffer:
Pass-through lines — output immediately, do not buffer:
#, ##, …)``` or ~~~); toggle a in-code-block flag and pass all lines through until the closing fence>-, *, +, or a digit followed by ./)--- / ... (pass the entire front-matter block through unchanged)Buffering — for all other lines, append the line's text to the current buffer (joining with a single space, trimming leading/trailing whitespace from each line).
Flushing — when a pass-through line (or end-of-file) is encountered, flush the buffer:
(?<=[.!?])\s+ — i.e., after a sentence-ending punctuation mark followed by whitespace.Write the result to the output path (or overwrite the input if no output path was given).
Implement the algorithm directly in your response — read the file, process it line-by-line following the rules above, and write the result. No external script is needed.
The sentence-split heuristic: a period followed by whitespace and an uppercase letter is a sentence boundary unless the word immediately before the period is a known abbreviation. Maintain a blocklist of common abbreviations that should never trigger a split:
Mr, Mrs, Ms, Dr, Prof, Sr, Jr, Rev, Gove.g, i.e, et al, vs, etcFig, Eq, Sec, Ch, Vol, No, ppWhen the token before the period matches one of these (case-insensitively), do not split. For ? and ! there is no abbreviation concern — always split.
development
Conduct rigorous thematic analysis (TA) of qualitative data following Braun and Clarke's (2006) six-phase framework. Use whenever the user mentions 'thematic analysis', 'TA', 'Braun and Clarke', 'qualitative coding', 'identifying themes', or asks for help analysing interviews, focus groups, open-ended survey responses, or transcripts to identify patterns. Also trigger for questions about inductive vs theoretical coding, semantic vs latent themes, essentialist vs constructionist epistemology, building a thematic map, or writing up a qualitative findings section. Covers all six phases, the four upfront analytic decisions, the 15-point quality checklist, and the five common pitfalls. Produces a Word document write-up and an annotated thematic map. Does NOT cover IPA, grounded theory, discourse analysis, conversation analysis, or narrative analysis — use a different method for those.
development
Guide users through writing a systematic literature review (SLR) following the PRISMA 2020 framework. Use this skill whenever the user mentions 'systematic review', 'systematic literature review', 'SLR', 'PRISMA', 'PRISMA 2020', 'PRISMA flow diagram', 'PRISMA checklist', or asks for help writing, structuring, or auditing a literature review that follows reporting guidelines. Also trigger when the user asks about inclusion/exclusion criteria for a review, search strategies for databases like Scopus/WoS/PubMed, study selection processes, risk of bias assessment, or narrative synthesis for a review paper. This skill covers the full PRISMA 2020 checklist (27 items), produces a Word document manuscript in strict journal article format, generates an annotated PRISMA flow diagram, and enforces APA 7th Edition referencing throughout. It does NOT cover meta-analysis or statistical pooling. By Chuah Kee Man.
testing
Performs placebo-in-time sensitivity analysis with hierarchical null model and optional Bayesian assurance. Use when checking model robustness, verifying lack of pre-intervention effects, or estimating study power.
data-ai
Fit, summarize, plot, and interpret a chosen CausalPy experiment. Use after the causal method has been selected, including when configuring PyMC/sklearn models and scale-aware custom priors.