skills/43-wentorai-research-plugins/skills/domains/biomedical/clinical-dialogue-agents-guide/SKILL.md
Papers on AI agents for clinical dialogue and medical QA
npx skillsauth add brycewang-stanford/Awesome-Agent-Skills-for-Empirical-Research clinical-dialogue-agents-guideInstall this skill globally with one command. Works with Claude Code, Cursor, and Windsurf.
3 of 9 scanners reported clean
Some scanners were skipped, did not run, or reported a non-clean status. Review each row below.
A curated collection of papers on AI agents for clinical dialogue — systems that conduct patient interviews, perform differential diagnosis, explain medical information, and support clinical decision-making through conversation. Covers medical QA benchmarks, patient simulation, clinical reasoning chains, and safety considerations unique to healthcare AI.
Agentic Clinical Dialogue
├── Patient-Facing Agents
│ ├── Symptom checkers
│ ├── Triage systems
│ ├── Health information
│ └── Follow-up management
├── Clinician-Facing Agents
│ ├── Diagnostic support
│ ├── Treatment recommendation
│ ├── Clinical documentation
│ └── Literature integration
├── Clinical Reasoning
│ ├── Differential diagnosis
│ ├── History taking
│ ├── Physical exam interpretation
│ └── Test ordering
├── Patient Simulation
│ ├── Standardized patients (SP)
│ ├── Medical education
│ └── Agent evaluation
└── Safety & Ethics
├── Hallucination in medicine
├── Bias in clinical AI
├── Liability frameworks
└── Informed consent
| System | Focus | Approach | |--------|-------|----------| | AMIE | Diagnostic dialogue | LLM with clinical reasoning | | Med-PaLM | Medical QA | Finetuned on medical data | | ChatDoctor | Patient consultation | LLaMA + medical knowledge | | AgentClinic | Clinical evaluation | Simulated clinical encounters | | ClinicalAgent | Decision support | Multi-step clinical reasoning |
benchmarks = {
"MedQA (USMLE)": {
"task": "US Medical Licensing Exam questions",
"size": "11,450 questions",
"metric": "Accuracy",
},
"PubMedQA": {
"task": "Biomedical yes/no/maybe QA",
"size": "1,000 expert-labeled",
"metric": "Accuracy",
},
"AgentClinic": {
"task": "Simulated clinical encounters",
"size": "Various patient scenarios",
"metric": "Diagnostic accuracy + safety",
},
"MedMCQA": {
"task": "Indian medical entrance MCQs",
"size": "194k questions",
"metric": "Accuracy",
},
"HealthSearchQA": {
"task": "Consumer health search questions",
"size": "3,375 questions",
"metric": "Expert evaluation",
},
}
for name, info in benchmarks.items():
print(f"\n{name}:")
print(f" Task: {info['task']}")
print(f" Size: {info['size']}")
### Critical Safety Issues
1. **Hallucination** — Fabricated medical facts are dangerous
2. **Scope limitations** — AI must know when to defer to human
3. **Emergency recognition** — Must identify urgent situations
4. **Bias** — Demographic biases in training data
5. **Liability** — Legal framework for AI medical advice
6. **Privacy** — Patient data protection (HIPAA compliance)
### Safety Patterns
- Always recommend consulting healthcare providers
- Flag emergency symptoms immediately
- Disclose AI nature to patients
- Log all interactions for audit
- Implement uncertainty quantification
### Foundations
1. AMIE: "Towards Conversational Diagnostic AI" (Google, 2024)
2. Med-PaLM 2: "Expert-level medical QA" (Google, 2023)
3. "Evaluating LLMs in Clinical Dialogue" (Survey, 2024)
### Clinical Reasoning
4. "Chain-of-Diagnosis" (Clinical CoT, 2024)
5. "AgentClinic: Evaluating Clinical Agents" (2024)
6. "Simulated Patient Encounters with LLMs" (2024)
### Safety
7. "Hallucination in Medical AI" (Survey, 2024)
8. "Red Teaming Medical LLMs" (2024)
development
Conduct rigorous thematic analysis (TA) of qualitative data following Braun and Clarke's (2006) six-phase framework. Use whenever the user mentions 'thematic analysis', 'TA', 'Braun and Clarke', 'qualitative coding', 'identifying themes', or asks for help analysing interviews, focus groups, open-ended survey responses, or transcripts to identify patterns. Also trigger for questions about inductive vs theoretical coding, semantic vs latent themes, essentialist vs constructionist epistemology, building a thematic map, or writing up a qualitative findings section. Covers all six phases, the four upfront analytic decisions, the 15-point quality checklist, and the five common pitfalls. Produces a Word document write-up and an annotated thematic map. Does NOT cover IPA, grounded theory, discourse analysis, conversation analysis, or narrative analysis — use a different method for those.
development
Guide users through writing a systematic literature review (SLR) following the PRISMA 2020 framework. Use this skill whenever the user mentions 'systematic review', 'systematic literature review', 'SLR', 'PRISMA', 'PRISMA 2020', 'PRISMA flow diagram', 'PRISMA checklist', or asks for help writing, structuring, or auditing a literature review that follows reporting guidelines. Also trigger when the user asks about inclusion/exclusion criteria for a review, search strategies for databases like Scopus/WoS/PubMed, study selection processes, risk of bias assessment, or narrative synthesis for a review paper. This skill covers the full PRISMA 2020 checklist (27 items), produces a Word document manuscript in strict journal article format, generates an annotated PRISMA flow diagram, and enforces APA 7th Edition referencing throughout. It does NOT cover meta-analysis or statistical pooling. By Chuah Kee Man.
testing
Performs placebo-in-time sensitivity analysis with hierarchical null model and optional Bayesian assurance. Use when checking model robustness, verifying lack of pre-intervention effects, or estimating study power.
data-ai
Fit, summarize, plot, and interpret a chosen CausalPy experiment. Use after the causal method has been selected, including when configuring PyMC/sklearn models and scale-aware custom priors.