skills/50-brycewang-aer-skills/skills/aer-rebuttal/SKILL.md
Use when responding to a Revise & Resubmit decision from AER, AER:Insights, or an AEJ, and a point-by-point response letter plus aligned manuscript revisions are needed. Handles triage, the concede / clarify / push-back decision, and the response-letter format that editors actually read.
npx skillsauth add brycewang-stanford/Awesome-Agent-Skills-for-Empirical-Research aer-rebuttalInstall this skill globally with one command. Works with Claude Code, Cursor, and Windsurf.
3 of 9 scanners reported clean
Some scanners were skipped, did not run, or reported a non-clean status. Review each row below.
A Revise & Resubmit at AER is precious — most submissions never get one. The goal of the rebuttal is not to "defend the paper." It is to give the editor a credible package they can send back to the referees with confidence, ending in either acceptance or a single short final round.
The single most important rule: revise the manuscript first; write the response letter against the revised manuscript, never against the old draft.
Do not use this skill for:
aer-submission)aer-robustness)Every reviewer comment ends in exactly one of:
No comment ends in the vague middle ground.
Convert the editor letter and each referee report into an atomized list of comments. Number them: E1, E2, ... for editor; R1.1, R1.2, ... for Referee 1; R2.1, ... for Referee 2.
For each comment, assign one category:
| Category | Definition |
|-----------------------|----------------------------------------------------------------------------|
| misunderstanding | The paper answers this, but the answer was buried |
| clarity_problem | The argument is fine; the prose caused confusion |
| evidence_gap | A genuine missing analysis or robustness check |
| scope_mismatch | Reasonable request, but outside the paper's contribution |
| incorrect_premise | Comment based on a factual or interpretive error |
| high_risk | Challenges novelty, validity, identification, or central claim |
| Severity | When to assign |
|------------|---------------------------------------------------------------------------|
| minor | Presentation, citation, small method detail |
| major | Evidence, statistics, method, scope — affects editorial confidence |
| blocking | Identification flaw, ethics, central-claim challenge — cannot draft around |
| unclear | Insufficient information; ask the editor for clarification |
Based on category + severity:
| Category × Severity | Action |
|--------------------------------------|---------------------------------------------------------|
| misunderstanding × any | Clarify in response; add cross-reference in manuscript |
| clarity_problem × any | Revise manuscript; brief response |
| evidence_gap × minor | Add robustness check; report in appendix |
| evidence_gap × major | Add analysis; report in main text or substantial appendix |
| evidence_gap × blocking | Restructure paper or escalate — may need new identification |
| scope_mismatch | Push back politely; cite scope boundary |
| incorrect_premise | Push back; cite the manuscript evidence that refutes |
| high_risk × any | Address head-on; never deflect |
Concede when:
Best move:
Clarify when:
Best move:
Push back only when:
Best move:
When R1 and R2 contradict on the same point: target the supportive reviewer. The editor's own preferences usually align with the more enthusiastic report. Address the dissenting reviewer respectfully, explain the alternative interpretation, and avoid making the manuscript worse to satisfy a minority view.
[Date]
[Editor name]
[Journal]
Dear [Editor],
Thank you for the opportunity to revise our manuscript [Title], MS#[XXX].
We are grateful for the constructive comments from you and both referees.
This revision addresses all comments as detailed below. Major changes include
[2-3 sentences summarizing the most substantive revisions].
Below we reproduce each comment in italics, followed by our response in
plain text. Page and line references are to the revised manuscript.
[Sincerely,]
[Authors]
---
# Response to the Editor
## Comment E1
*[Verbatim quote of editor comment.]*
**Response.** We agree. We have [action taken]. See revised manuscript,
page 4, lines 14-22.
---
# Response to Referee 1
## Comment R1.1
*[Verbatim quote.]*
**Response.** [State the action in the first 1-2 sentences.]
[Then provide substance.] See revised manuscript, page X, Section Y.
## Comment R1.2
*[...]*
---
# Response to Referee 2
...
Assume the editor scans for three things on each comment:
Write the first sentence of every response so all three answers are visible.
Prefer:
Avoid:
latexdiff, or Word track-changes) and a clean version.If the editor wrote a summary letter with their own priorities (common at AER), treat the editor's letter as authoritative. When editor and referee disagree, follow the editor. Acknowledge the conflict in your response to the relevant referee comment.
When working from the AER-skills repository or plugin bundle, read examples/rebuttal-example.md only when the user needs a complete response-letter model or a concrete triage example.
COMMENTS TOTAL: <n>
COMMENTS BY ACTION: <conceded / clarified / both / declined>
SEVERITY DISTRIBUTION: <minor / major / blocking>
MANUSCRIPT CHANGES MADE: <yes — list / no>
RESPONSE LETTER LENGTH: <n> pages
READY TO SUBMIT REVISION: <yes / no — with blockers>
NEXT SKILL: aer-submission (final preflight on the revised package)
development
Conduct rigorous thematic analysis (TA) of qualitative data following Braun and Clarke's (2006) six-phase framework. Use whenever the user mentions 'thematic analysis', 'TA', 'Braun and Clarke', 'qualitative coding', 'identifying themes', or asks for help analysing interviews, focus groups, open-ended survey responses, or transcripts to identify patterns. Also trigger for questions about inductive vs theoretical coding, semantic vs latent themes, essentialist vs constructionist epistemology, building a thematic map, or writing up a qualitative findings section. Covers all six phases, the four upfront analytic decisions, the 15-point quality checklist, and the five common pitfalls. Produces a Word document write-up and an annotated thematic map. Does NOT cover IPA, grounded theory, discourse analysis, conversation analysis, or narrative analysis — use a different method for those.
development
Guide users through writing a systematic literature review (SLR) following the PRISMA 2020 framework. Use this skill whenever the user mentions 'systematic review', 'systematic literature review', 'SLR', 'PRISMA', 'PRISMA 2020', 'PRISMA flow diagram', 'PRISMA checklist', or asks for help writing, structuring, or auditing a literature review that follows reporting guidelines. Also trigger when the user asks about inclusion/exclusion criteria for a review, search strategies for databases like Scopus/WoS/PubMed, study selection processes, risk of bias assessment, or narrative synthesis for a review paper. This skill covers the full PRISMA 2020 checklist (27 items), produces a Word document manuscript in strict journal article format, generates an annotated PRISMA flow diagram, and enforces APA 7th Edition referencing throughout. It does NOT cover meta-analysis or statistical pooling. By Chuah Kee Man.
testing
Performs placebo-in-time sensitivity analysis with hierarchical null model and optional Bayesian assurance. Use when checking model robustness, verifying lack of pre-intervention effects, or estimating study power.
data-ai
Fit, summarize, plot, and interpret a chosen CausalPy experiment. Use after the causal method has been selected, including when configuring PyMC/sklearn models and scale-aware custom priors.