activeinferenceinstitute/gnn-template-init
src/template/SKILL.md
GNN pipeline template and initialization system. Use when creating new pipeline steps, bootstrapping project structure, or understanding the thin orchestrator pattern for GNN module development.
$ install --global
skillsauthnpx skillsauth add activeinferenceinstitute/generalizednotationnotation gnn-template-initInstall this skill globally with one command. Works with Claude Code, Cursor, and Windsurf.
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SKILL.md
- name:
- gnn-template-init
- description:
- GNN pipeline template and initialization system. Use when creating new pipeline steps, bootstrapping project structure, or understanding the thin orchestrator pattern for GNN module development.
GNN Template & Initialization (Step 0)
Purpose
Initializes the pipeline environment and provides the canonical template for creating new pipeline steps. This is the entry point for the 25-step GNN pipeline.
Key Commands
# Run template initialization
python src/0_template.py --target-dir input/gnn_files --output-dir output --verbose
# Use as part of full pipeline
python src/main.py --only-steps 0 --verbose
API
from template import (
process_template_standardized, process_single_file,
validate_file, generate_correlation_id,
safe_template_execution, demonstrate_utility_patterns,
get_version_info
)
# Process template step (used by pipeline)
result = process_template_standardized(target_dir, output_dir, logger)
# Process a single file
result = process_single_file(file_path, output_dir, logger)
# Validate a file
is_valid = validate_file(file_path)
# Generate correlation ID for tracing
corr_id = generate_correlation_id()
Key Exports
process_template_standardized— main pipeline processing functionprocess_single_file— process individual filevalidate_file— file validationgenerate_correlation_id— unique ID for pipeline tracingsafe_template_execution— execution with error handlingget_version_info— module version metadata
Thin Orchestrator Pattern
# N_module.py — Thin orchestrator (<150 lines)
from utils.pipeline_template import create_standardized_pipeline_script
run_script = create_standardized_pipeline_script("N_module.py", process_func, "Description")
- Orchestrators handle ONLY: arg parsing, logging, output dirs, delegation
- ALL domain logic lives in
src/module/processor.py - Exit codes: 0=success, 1=error, 2=warnings
MCP Tools
This module registers tools with the GNN MCP server (see mcp.py):
template.process_filetemplate.process_directorytemplate.get_info
References
- AGENTS.md — Module documentation
- README.md — Usage guide
- SPEC.md — Module specification
- pipeline_step_template.py — Canonical template
Documentation
- README: Module Overview
- AGENTS: Agentic Workflows
- SPEC: Architectural Specification
- SKILL: Capability API
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