a5c-ai/ligand-exchange-protocol-manager
library/specializations/domains/science/nanotechnology/skills/ligand-exchange-protocol-manager/SKILL.md
Surface chemistry skill for managing ligand exchange reactions, bioconjugation protocols, and functional group quantification
$ install --global
skillsauthnpx skillsauth add a5c-ai/babysitter ligand-exchange-protocol-managerInstall this skill globally with one command. Works with Claude Code, Cursor, and Windsurf.
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SKILL.md
- name:
- ligand-exchange-protocol-manager
- description:
- Surface chemistry skill for managing ligand exchange reactions, bioconjugation protocols, and functional group quantification
- specialization:
- nanotechnology
- domain:
- science
- category:
- synthesis-materials
- priority:
- high
- phase:
- 6
Ligand Exchange Protocol Manager
Purpose
The Ligand Exchange Protocol Manager skill provides systematic management of surface functionalization reactions for nanoparticles, enabling controlled ligand exchange, bioconjugation, and quantification of surface functional groups.
Capabilities
- Ligand exchange reaction design
- Bioconjugation chemistry selection
- Click chemistry protocols
- Functional group quantification (TNBS, Ellman's)
- Conjugation efficiency optimization
- Surface coverage calculation
Usage Guidelines
Ligand Exchange Design
-
Chemistry Selection
- Match incoming ligand affinity
- Consider exchange kinetics
- Optimize solvent system
-
Bioconjugation Protocols
- EDC/NHS for carboxyl-amine coupling
- Maleimide-thiol for cysteine targeting
- Click chemistry for orthogonal conjugation
-
Surface Coverage Quantification
- UV-Vis for chromophoric ligands
- TGA for organic content
- XPS for elemental analysis
Process Integration
- Nanomaterial Surface Functionalization Pipeline
- Nanoparticle Drug Delivery System Development
- Nanosensor Development and Validation Pipeline
Input Schema
{
"nanoparticle_type": "string",
"current_ligand": "string",
"target_ligand": "string",
"target_functionality": "amine|carboxyl|thiol|azide|alkyne",
"conjugation_target": "string (optional)"
}
Output Schema
{
"exchange_protocol": {
"solvent": "string",
"temperature": "number (C)",
"duration": "number (hours)",
"ligand_excess": "number (equivalents)"
},
"expected_coverage": "number (molecules/nm2)",
"verification_methods": ["string"],
"stability_notes": "string"
}
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